Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795421.1_cds_XP_016444049.1_3828
CDS Infomation

[gene=LOC107769351] [db_xref=GeneID:107769351] [protein=polygalacturonase-like] [protein_id=XP_016444049.1] [location=complement(join(20440..20685,21518..22033,22932..23270,23864..23995))] [gbkey=CDS]
Sequence

ATGTATTTGAACTTCAAATTATCATTTGCATTTGCACTTTTATTTCTTGTGCACATAGGA
GAATCTCAACCTGCAGTTTTTGATGTGACTAAATTTGGTGCAAAGCCAGATAGCAATGAA
GATATTAGCAAGGCTCTATTAAGTGCATTTAAGGAGGCATGCAACTCAAAAATCCCAAGT
AAAGTTGTGATTCCAAAAGGCACATATTTGATGAATCAAGTGAGACTAGAAGGTAATTGC
AAAGCCCCTATAGAACTTGAAATTCAAGCNGCCCCTATAGAACTTCAAATTCAAGCCACT
TTGAAAGCTCCTCCAAATCCAAGCCAACTCAAGAAAGATATGGAATGGTTAACTATTAAT
CATATTGATCATTTCACACTATCTGGTGGTGGAATTTTTGATGGCCAAGGAGAACAAGGT
TGGGCACAAAATGACTGTAAAAATTCAGAAAGTTGCGGTAAACTTCCAAATAATTTGAGC
TTCAACTTCCTAACAAATTCCATAATCAGAGACATAACTTCATTGGACAGCAAACTATTC
CACATTAATGTGTTAGGGTGCAAGAACTTAACATTCATTGGAGTTAACATAAAAGCTCCA
GCACAAAGCCTAAACACAGATGGTATTCATGTTGCAAGATCAAGAGGACTCAACATTACA
AATTCACAAATTGGTACAGGAGATGATTGCATATCAATTGGTGATGGAATTCAACAAATG
TACATAACAAATGTAACATGTGGACCTGGCCATGGAATTAGTGTTGGTAGTCTTGGAAAA
ACTCCAGGAGAATTGCCTGTGGTTGGAGTTTTTGTGCAAAATTGCACATTTATTGACACT
GACAATGGTGTGAGGGTGAAGACATGGCCAGCTTCACATAATGGTGTTGTTAGAGATTTG
CACTATGAGGATATTATTGTGCAAAATGTTAGCAATCCTGTTGTTATTGATCAACTCTAT
TGCCCTTATAATCAGTGCAAGAAAGATTTGCCATCACAAGTGAAGATTAGCAAAGTGAGT
TTCAAGAACATAAGAGGAACATCAAGAACTCAAGATGCTATAAAAATTAATTGTAGTAAA
GGTGTGCCATGTGAAGGTGTGGAAGTTGGAGATATTGACATAACCTATAATGGAAATGAA
GGGCCAGCCAAGTCTACTTGCCAGAATGTTGACCCAAGTTTTGTAGGCAAACAGATTCCA
CCAGTTTGCGCTGGTCCTGCAGAGTCTTCTTGA

Peptide Sequence

PEP ID

XP_016444049.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MYLNFKLSFAFALLFLVHIGESQPAVFDVTKFGAKPDSNEDISKALLSAFKEACNSKIPS
KVVIPKGTYLMNQVRLEGNCKAPIELEIQAAPIELQIQATLKAPPNPSQLKKDMEWLTIN
HIDHFTLSGGGIFDGQGEQGWAQNDCKNSESCGKLPNNLSFNFLTNSIIRDITSLDSKLF
HINVLGCKNLTFIGVNIKAPAQSLNTDGIHVARSRGLNITNSQIGTGDDCISIGDGIQQM
YITNVTCGPGHGISVGSLGKTPGELPVVGVFVQNCTFIDTDNGVRVKTWPASHNGVVRDL
HYEDIIVQNVSNPVVIDQLYCPYNQCKKDLPSQVKISKVSFKNIRGTSRTQDAIKINCSK
GVPCEGVEVGDIDITYNGNEGPAKSTCQNVDPSFVGKQIPPVCAGPAESS

Transcript Sequence

Gene sequence data has not been registered.